packfile: refactor kept-pack cache to work with packfile stores

The kept pack cache is a cache of packfiles that are marked as kept
either via an accompanying ".kept" file or via an in-memory flag. The
cache can be retrieved via `kept_pack_cache()`, where one needs to pass
in a repository.

Ultimately though the kept-pack cache is a property of the packfile
store, and this causes problems in a subsequent commit where we want to
move down the packfile store to be a per-object-source entity.

Prepare for this and refactor the kept-pack cache to work on top of a
packfile store instead. While at it, rename both the function and flags
specific to the kept-pack cache so that they can be properly attributed
to the respective subsystems.

Signed-off-by: Patrick Steinhardt <ps@pks.im>
Signed-off-by: Junio C Hamano <gitster@pobox.com>

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